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= Sage 4.0.2 Release Tour =

Sage 4.0.2 was released on FIXME. For the official, comprehensive release note, please refer to FIXME. A nicely formatted version of this release tour can be found at FIXME. The following points are some of the foci of this release:

 *


== Algebra ==


 * Correct precision bound in {{{hilbert_class_polynomial()}}} and miscellaneous new functions (John Cremona) -- The two new functions are {{{elliptic_j()}}} in {{{sage/functions/special.py}}}, and {{{is_primitive()}}} in the class {{{BinaryQF}}} of {{{sage/quadratic_forms/binary_qf.py}}}. The function {{{elliptic_j(z)}}} returns the elliptic modular {{{j}}}-function evaluated at {{{z}}}. The function {{{is_primitive()}}} determines whether the binary quadratic form {{{ax^2 + bxy + cy^2}}} satisfies {{{gcd(a,b,c) = 1}}}, i.e. that it is primitive. Here are some examples on using these new functions:
 {{{
sage: elliptic_j(CC(i))
1728.00000000000
sage: elliptic_j(sqrt(-2.0))
8000.00000000000
sage: Q = BinaryQF([6,3,9])
sage: Q.is_primitive()
False
sage: Q = BinaryQF([1,1,1])
sage: Q.is_primitive()
True
 }}}


 * Efficient Lagrange interpolation polynomial (Yann Laigle-Chapuy) -- Calculating the Lagrange interpolation polynomial of a set of points is now up to 48% faster than previously. The following timing statistics were obtained using the machine sage.math:
 {{{
# BEFORE

sage: R = PolynomialRing(QQ, 'x')
sage: %timeit R.lagrange_polynomial([(0,1),(2,2),(3,-2),(-4,9)])
1000 loops, best of 3: 824 µs per loop
sage: R.lagrange_polynomial([(0,1),(2,2),(3,-2),(-4,9)])
-23/84*x^3 - 11/84*x^2 + 13/7*x + 1
sage: R = PolynomialRing(GF(2**3,'a'), 'x')
sage: a = R.base_ring().gen()
sage: timeit("R.lagrange_polynomial([(a^2+a,a),(a,1),(a^2,a^2+a+1)])")
625 loops, best of 3: 111 µs per loop
sage: R.lagrange_polynomial([(a^2+a,a),(a,1),(a^2,a^2+a+1)])
a^2*x^2 + a^2*x + a^2


# AFTER

sage: R = PolynomialRing(QQ, 'x')
sage: %timeit R.lagrange_polynomial([(0,1),(2,2),(3,-2),(-4,9)])
1000 loops, best of 3: 425 µs per loop
sage: R.lagrange_polynomial([(0,1),(2,2),(3,-2),(-4,9)])
-23/84*x^3 - 11/84*x^2 + 13/7*x + 1
sage: R = PolynomialRing(GF(2**3,'a'), 'x')
sage: a = R.base_ring().gen()
sage: timeit("R.lagrange_polynomial([(a^2+a,a),(a,1),(a^2,a^2+a+1)])")
625 loops, best of 3: 86.4 µs per loop
sage: R.lagrange_polynomial([(a^2+a,a),(a,1),(a^2,a^2+a+1)])
a^2*x^2 + a^2*x + a^2
 }}}


 * Deprecate the method {{{__len__()}}} for a matrix group (Nicolas Thiery) -- The method {{{__len__()}}} of the class {{{MatrixGroup_gap}}} in {{{sage/groups/matrix_gps/matrix_group.py}}} is now deprecated and will be removed in a future release. To get the number of elements in a matrix group, users are advised to use the method {{{cardinality()}}} instead. The method {{{order()}}} is essentially the same as {{{cardinality()}}}, so {{{order()}}} will be deprecated in a future release.


== Algebraic Geometry ==


 * Optimize hyperelliptic curve arithmetic (Nick Alexander) -- Arithmetics with hyperelliptic curves can be up to 6x faster than previously. The following timing statistics were obtained using the maching sage.math:
 {{{
#BEFORE

sage: F = GF(next_prime(10^30))
sage: x = F['x'].gen()
sage: f = x^7 + x^2 + 1
sage: H = HyperellipticCurve(f, 2*x)
sage: J = H.jacobian()(F)
verbose 0 (902: multi_polynomial_ideal.py, dimension) Warning: falling back to very slow toy implementation.
sage: Q = J(H.lift_x(F(1)))
sage: %time ZZ.random_element(10**10) * Q;
CPU times: user 0.65 s, sys: 0.02 s, total: 0.67 s
Wall time: 0.68 s
sage: %time ZZ.random_element(10**10) * Q;
CPU times: user 1.08 s, sys: 0.00 s, total: 1.08 s
Wall time: 1.08 s
sage: %time ZZ.random_element(10**10) * Q;
CPU times: user 0.72 s, sys: 0.02 s, total: 0.74 s
Wall time: 0.74 s
sage: %time ZZ.random_element(10**10) * Q;
CPU times: user 0.67 s, sys: 0.00 s, total: 0.67 s
Wall time: 0.67 s
sage: %time ZZ.random_element(10**10) * Q;
CPU times: user 0.66 s, sys: 0.00 s, total: 0.66 s
Wall time: 0.66 s


# AFTER

sage: F = GF(next_prime(10^30))
sage: x = F['x'].gen()
sage: f = x^7 + x^2 + 1
sage: H = HyperellipticCurve(f, 2*x)
sage: J = H.jacobian()(F)
verbose 0 (919: multi_polynomial_ideal.py, dimension) Warning: falling back to very slow toy implementation.
sage: Q = J(H.lift_x(F(1)))
sage: %time ZZ.random_element(10**10) * Q;
CPU times: user 0.14 s, sys: 0.01 s, total: 0.15 s
Wall time: 0.15 s
sage: %time ZZ.random_element(10**10) * Q;
CPU times: user 0.10 s, sys: 0.00 s, total: 0.10 s
Wall time: 0.10 s
sage: %time ZZ.random_element(10**10) * Q;
CPU times: user 0.09 s, sys: 0.00 s, total: 0.09 s
Wall time: 0.10 s
sage: %time ZZ.random_element(10**10) * Q;
CPU times: user 0.09 s, sys: 0.01 s, total: 0.10 s
Wall time: 0.10 s
sage: %time ZZ.random_element(10**10) * Q;
CPU times: user 0.10 s, sys: 0.00 s, total: 0.10 s
Wall time: 0.11 s
 }}}


== Basic Arithmetic ==


== Build ==


 * FIXME: summarize #6170


== Calculus ==


== Coding Theory ==


 * Hexads in {{{S(5,6,12)}}} and mathematical blackjack (David Joyner) -- Implements kittens, hexads and mathematical blackjack as described in the following papers:
  * R. Curtis. The Steiner system {{{S(5,6,12)}}}, the Mathieu group {{{M_{12}}}}, and the kitten. In M. Atkinson (ed.) Computational Group Theory, Academic Press, 1984.
  * J. Conway. Hexacode and tetracode -- MINIMOG and MOG. In M. Atkinson (ed.) Computational Group Theory, Academic Press, 1984.
  * J. Conway and N. Sloane. Lexicographic codes: error-correcting codes from game theory. IEEE Transactions on Information Theory, 32:337-348, 1986.
  * J. Kahane and A. Ryba. The hexad game. Electronic Journal of Combinatorics, 8, 2001. http://www.combinatorics.org/Volume_8/Abstracts/v8i2r11.html


== Combinatorics ==


== Commutative Algebra ==


 * Enable Singular's coefficient rings which are not fields (Martin Albrecht) -- Singular 3-1-0 supports coefficient rings which are not fields. In particular, it supports {{{ZZ}}} and {{{ZZ/nZZ}}} now. These are now natively supported in Sage.


== Cryptography ==


 * S-box to CNF Conversion (Martin Albrecht) -- New method {{{cnf()}}} in the class {{{SBox}}} of {{{sage/crypto/mq/sbox.py}}} for converting an S-box to conjunctive normal form. Here are some examples on S-box to CNF conversion:
 {{{
sage: S = mq.SBox(1,2,0,3); S
(1, 2, 0, 3)
sage: S.cnf()

[(1, 2, -3),
 (1, 2, 4),
 (1, -2, 3),
 (1, -2, -4),
 (-1, 2, -3),
 (-1, 2, -4),
 (-1, -2, 3),
 (-1, -2, 4)]
sage: # convert this representation to the DIMACS format
sage: print S.cnf(format='dimacs')
p cnf 4 8
1 2 -3 0
1 2 4 0
1 -2 3 0
1 -2 -4 0
-1 2 -3 0
-1 2 -4 0
-1 -2 3 0
-1 -2 4 0

sage: # as a truth table
sage: log = SymbolicLogic()
sage: s = log.statement(S.cnf(format='symbolic'))
sage: log.truthtable(s)[1:]

[['False', 'False', 'False', 'False', 'False'],
 ['False', 'False', 'False', 'True', 'False'],
 ['False', 'False', 'True', 'False', 'False'],
 ['False', 'False', 'True', 'True', 'True'],
 ['False', 'True', 'False', 'False', 'True'],
 ['False', 'True', 'False', 'True', 'True'],
 ['False', 'True', 'True', 'False', 'True'],
 ['False', 'True', 'True', 'True', 'True'],
 ['True', 'False', 'False', 'False', 'True'],
 ['True', 'False', 'False', 'True', 'True'],
 ['True', 'False', 'True', 'False', 'True'],
 ['True', 'False', 'True', 'True', 'True'],
 ['True', 'True', 'False', 'False', 'True'],
 ['True', 'True', 'False', 'True', 'True'],
 ['True', 'True', 'True', 'False', 'True'],
 ['True', 'True', 'True', 'True', 'True']]
 }}}


== Graph Theory ==


 * LaTeX output for (combinatorial) graphs (Robert Beezer, Fidel Barrera Cruz) -- Implement the option {{{tkz_style}}} to output graphs in LaTeX format so that they could be processed by pgf/tkz. Here's an example of the Petersen graph visualized using tkz:
 {{{
g = graphs.PetersenGraph()
g.set_latex_options(tkz_style='Art')
view(g, pdflatex=True)
 }}}
{{attachment:petersen-latex.png}}


== Graphics ==


== Group Theory ==


 * FIXME: summarize #6263

 * FIXME: summarize #6123


== Interfaces ==


== Linear Algebra ==


 * FIXME: summarize #6178

 * FIXME: summarize #5510

 * FIXME: summarize #2256


== Miscellaneous ==


 * FIXME: summarize #6089

 * FIXME: summarize #6110


== Modular Forms ==


== Notebook ==


 * FIXME: summarize #6259

 * FIXME: summarize #6225

 * FIXME: summarize #5371


== Number Theory ==


 * FIXME: summarize #5976

 * FIXME: summarize #5842

 * FIXME: summarize #6205

 * FIXME: summarize #6193

 * FIXME: summarize #6044

 * FIXME: summarize #6046


== Numerical ==


== Packages ==


 * Upgrade [[http://numpy.scipy.org|NumPy]] to version 1.3.0 latest upstream release (Jason Grout).


 * Upgrade [[http://www.scipy.org|SciPy]] to version 0.7 latest upstream release (Jason Grout).


 * Upgrade [[http://www.singular.uni-kl.de|Singular]] to version 3-1-0 latest upstream release (Martin Albrecht).


 * Upgrade [[http://www.flintlib.org|FLINT]] to version 1.3.0 latest upstream release (Nick Alexander).


 * Update the [[http://www.mpir.org|MPIR]] spkg to version {{{mpir-1.2.p3.spkg}}} (Nick Alexander).


 * Remove [[http://sage.math.washington.edu/home/wdj/guava|Guava]] as a standard Sage package (David Joyner).


 * FIXME: summarize #6298


== Symbolics ==


== Topology ==